Mangul Lab2020-03-20T19:11:57+00:00


We design, develop, and apply novel data-driven, computational approaches that accelerate the diffusion of genomics and biomedical data into translational research and education.

Lab news!

Mangul Lab submits preprint exploring read alignment techniques for short and long reads

Last week, Mangul Lab at USC shared a new preprint, which presents our group’s review of the role algorithms have on speed and efficiency of read aligners. Overview of read alignment Modern sequencing platforms generate enormous amounts of genomic data in the form of nucleotide sequences or [...]

By |March 17th, 2020|

Mangul Lab publishes first paper, a novel tool for managing bioinformatics analyses

We are proud to announce that our lab has published our first peer-reviewed paper since we established at USC School of Pharmacy in Fall 2019! Jaque, our postdoctoral scholar, is the first author on this paper! Congratulations! Our paper, which presents a novel tool for managing bioinformatics analyses on [...]

By |March 3rd, 2020|

Mangul Lab celebrates conclusion of first semester at USC School of Pharmacy

Our group is celebrating the end of a productive calendar year—and the conclusion of our first semester at USC School of Pharmacy! We are proud to share the preprints and papers we produced with our incredible collaborators at ZarLab in the Department of Computational Medicine at UCLA, members of our [...]

By |December 20th, 2019|

Mangul Lab at USC welcomes first postdoctoral scholar Jaqueline Brito

We are very excited to announce the appointment of our first postdoctoral scholar in Mangul Lab at USC! Dr. Jaqueline Brito holds a PhD in Computer Science from the University of São Paulo, Brazil. Jaque’s doctoral research primarily focused on index-based methods for large databases and distributed systems, particularly [...]

By |December 19th, 2019|

Mangul Lab submits preprint presenting a comprehensive review of the diagnostic and therapeutic potential of metagenomics

Just before the Thanksgiving holiday break, Mangul Lab at USC released our second preprint—a review of the diagnostic and therapeutic potential of metagenomics. Overview of clinical metagenomics pipeline Several members of our group—Caitlin Loeffler (Bioinformatics Analyst), Lana Martin (Project Specialist), Yutong Chang (Master’s student), Jeremy Rotman (alumni)—collaborated with [...]

By |December 3rd, 2019|