Mangul Lab publishes third paper – an analysis of microbial reference databases

Today we celebrate the publication of our third peer-reviewed paper since Mangul Lab launched at USC! Consensus of fungal and bacterial genome representation across multiple reference databases. Cailtin Loeffler and Aaron Karlsberg, both alumnus of Serghei’s group at UCLA and currently scientific research staff with Mangul Lab [...]

Mangul Lab publishes second paper – a benchmarking study of error correction methods

Today we celebrate the publication of our second peer-reviewed paper since Mangul Lab launched at USC Keith Mitchell, alumnus of Serghei’s group at UCLA, is the first author of  “Benchmarking of computational error-correction methods for next-generation sequencing data,” which is now available online. Jaque (our postdoc), Lana (our project [...]

Mangul Lab publishes first paper, a novel tool for managing bioinformatics analyses

We are proud to announce that our lab has published our first peer-reviewed paper since we established at USC School of Pharmacy in Fall 2019! Jaque, our postdoctoral scholar, is the first author on this paper! Congratulations! Our paper, which presents a novel tool for managing bioinformatics analyses on [...]

Mangul Lab submits preprint presenting a comprehensive review of the diagnostic and therapeutic potential of metagenomics

Just before the Thanksgiving holiday break, Mangul Lab at USC released our second preprint—a review of the diagnostic and therapeutic potential of metagenomics. Overview of clinical metagenomics pipeline Several members of our group—Caitlin Loeffler (Bioinformatics Analyst), Lana Martin (Project Specialist), Yutong Chang (Master’s student), Jeremy Rotman (alumni)—collaborated with [...]

Mangul Lab submits first preprint presenting app for managing high-throughput analyses via mobile device

This week, Mangul Lab at USC released our first preprint, a paper that presents Telescope - a tool developed by our group for management of cloud-based high-throughput analyses! In today’s world of big data, high-performance computational facilities are capable of processing considerable volumes of data. Computational resources capable of analyzing [...]